Title:	TissueGraph: Cell-to-cell Spatial Alignment
DNr:	Berzelius-2026-139
Project Type:	LiU Berzelius
Principal Investigator:	Sanja Vickovic <sanja.vickovic@scilifelab.uu.se>
Affiliation:	Uppsala universitet
Duration:	2026-06-01 – 2026-12-01
Classification:	30401
Homepage:	https://github.com/nygctech/tissueGraph
Keywords:

Abstract

This project develops methods for reconstructing whole tissues at single-cell resolution by combining foundation model embeddings with geometric graph neural networks to align serial tissue sections across multiple molecular modalities and fields of view.