DNA network test 2024DS Graphic analysis
| Title: |
DNA network test 2024DS Graphic analysis |
| DNr: |
NAISS 2024/22-1408 |
| Project Type: |
NAISS Small Compute |
| Principal Investigator: |
Shuai Lang <shuaila@kth.se> |
| Affiliation: |
Kungliga Tekniska högskolan |
| Duration: |
2024-10-28 – 2025-11-01 |
| Classification: |
10203 |
| Keywords: |
|
Abstract
In this project, we aim to perform graphical analysis of a DNA network, formed through chemical and biochemical reactions of DNA. The analysis relies on cuGraph, a CUDA-based graph analysis library that requires Nvidia GPUs for efficient processing.
Initially, I applied for access to the PDC Dardel-GPU, but I recently discovered that its GPUs are AMD, which are not compatible with cuGraph. Therefore, to carry out the graphical analysis, I will need to use Tetralith, which provides the necessary Nvidia GPU resources.
