Bayesian MCMC phylogenetics
Title: Bayesian MCMC phylogenetics
SNIC Project: SNIC 2021/5-118
Project Type: SNIC Medium Compute
Principal Investigator: Fredrik Ronquist <fredrik.ronquist@nrm.se>
Affiliation: Naturhistoriska riksmuseet
Duration: 2021-03-01 – 2022-03-01
Classification: 10612
Homepage: http://www.ronquistlab.github.io/
Keywords:

Abstract

We are developing software (MrBayes, RevBayes and TreePPL) for probabilistic inference in phylogeny and evolution, and we are using this software for empirical phylogenomic analyses. The analyses are often used to demonstrate new techniques or tackle challenging empirical analyses with new algorithms or under new evolutionary models. We will also be bench-marking our software against other computational phylogenetics and probabilistic programming software, including PhyloBayes, BayesCode and Birch.