Title:	Identify 20-mers absent from GRCh37/GRCm38 using BLAT
DNr:	SNIC 2017/1-233
Project Type:	SNIC Medium Compute
Principal Investigator:	Silvano Garnerone <silvano.garnerone@scilifelab.se>
Affiliation:	Karolinska Institutet
Duration:	2017-05-22 – 2017-08-01
Classification:	10604
Keywords:

Abstract

We have a new set of 20-mers to check for homology against GRCh37 and GRCm38. We need them to be 'orthogonal', i.e., with homology lower than 60%, to use them as barcodes in PCR and FISH experiments.